In order to study the effect of filled joints on the transmission of stress waves at different frequencies, the paper designs joint models with different thickness and strength according to the characteristics of the filling joint, and the jointing problem of normal incidence of stress waves with different frequencies is simulated to study the propagation law of stress waves in filled joints with different strengths and thicknesses. The results show: for filled joints with different strengths and thicknesses, the transmission coefficient decreases gradually with the increase of the frequency of the stress wave, and filled joints serve to the "filtering" effect of high frequency waves. The transmission coefficient decreases gradually with the increase of frequency and tends to a stable value as the frequency increases, the lower strength and the greater thickness, the phenomenon is more obvious.